DrugInteract
Educational drug-interaction reference that checks what each drug's FDA label says about another. Fully client-side — no backend, no data collection.
Small, focused tools. The browser-based ones run entirely on your machine, with no data sent anywhere, and each released tool has its source on GitHub.
Use in your browser
enrichlite
Gene-set over-representation analysis (ORA) for human and mouse that runs entirely in the browser. Supports GO, Hallmark, and Reactome gene sets.
drugtargets
Drug-target exploration and repurposing-hypothesis tool: Boolean gene queries, drug-to-targets lookup, and target-overlap similarity, built on Open Targets and openFDA.
neokine
Client-side pose visualization — draws a MediaPipe skeleton and plots simple kinematics (joint angles, velocity, asymmetry) over an image, video, or webcam. Runs entirely in the browser; not a diagnostic tool.
neokine-labs Experimental
A playground in the neokine family: live MediaPipe Holistic pose and face tracking with real-time overlays and exploratory behavior heuristics. In-browser and experimental; not a diagnostic tool.
Platforms
MyVivarium
Open-source, cloud-based platform for managing research animal colonies, with QR-code cage cards and real-time IoT environmental monitoring. Published in CSBJ (2025); deployed at 3 partner labs supporting 200+ animals.
MyVivarium v2
Version 2 of MyVivarium, shaped by feedback from partner labs: rebuilt workflows, a modernized stack (Docker, Playwright test suite), and broader experimental, husbandry, and operational support. In staged deployment at the University of Dayton (2026).
SciGenda Work in progress
Open-source, web-based lab-management platform for planning, scheduling, and tracking scientific experiments — per mouse, per project, per researcher.
Pipelines & research code
Research pipelines in active development. Source is published as each one stabilizes.
- istoflow Work in progress Reproducible pipeline for registering 2D mouse-brain histology to a reference atlas.
- citelas Work in progress Multi-source citation aggregation and analysis — pulls and reconciles publication metrics across providers.
More experiments and works in progress live on GitHub.